Software and Databases

• Lancet is a microassembly-based somatic SNV and indel caller.
• Conpair is concordance and contamination estimator for tumor and matched normal pairs of DNA samples.
• Graphlet kernel is a graph classification method based on efficient enumeration of small local subgraphs (graphlets).
• UbPred is a sequence-based predictor of protein ubiquitination sites.
• Composition Profiler is a web-based tool that automates detection of enrichment or depletion patterns of individual amino acids or groups of amino acids classified by several physico-chemical and structural properties.
• Two Sample Logo is a procedure for discovery of statistically significant position-specific differences in residue compositions between two multiple sequence alignments.
• DisProt is a curated database of intrinsically disordered proteins.