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Olga Tanaseichuk
I am a PhD candidate at the department of
Computer Science and Engineering of
University of California, Riverside.
I work in the
Algorithms and Computational Biology Lab with Professor
Tao Jiang.
Research Interests
- Data Mining and Machine Learning
- Computational Biology and Bioinformatics
- Design and Analysis of Algorithms
Projects
Publications
- Olga Tanaseichuk, James Borneman and Tao Jiang.
Separating Metagenomic Short Reads into Genomes via Clustering.
Algorithms for Molecular Biology, 2012, 7(1):27.
- Olga Tanaseichuk, James Borneman and Tao Jiang.
A Probabilistic Approach to Accurate Abundance-Based Binning of Metagenomic Reads.
12th Workshop on Algorithms for Bioinformatics
(WABI 2012), Ljubljana, Slovenia, Sept. 2012, pp. 404-416
Invited Presentations
- O. Tanaseichuk and T. Jiang. Efficient separation of metagenomic short reads into genomes
via multistage clustering. The Joint Statistical Meetings (JSM), San Diego, CA, Aug. 2012
- O. Tanaseichuk and T. Jiang. Separating Metagenomic Data into Genomes via Clustering.
First Annual RECOMB Satellite Workshop on Massively Parallel Sequencing, 2011, Vancouver, Canada
Education
- Ph.D Computer Science, University of California, Riverside, Sep. 2009 - now
- M.S. Applied Mathematics, Kyiv National Taras Shevchenko University, Kyiv, Ukraine, 2007 - 2009
- B.S. Applied Mathematics, Kyiv National Taras Shevchenko University, Kyiv, Ukraine, 2003 - 2007
TA
Outstanding Teaching Assistant Award, 2010-2011
- CS238: Algorithmic Techniques in Computational Biology, Spring 2013
- CS150: The Theory of Automata and Formal Languages, Winter/Spring 2011 and 2012
- CS141: Intermediate Data Structures and Algorithms, Fall 2011
- CS10: Introduction to Computer Science, Fall 2010
Courses
- CS218: Design and Analysis of Algorithms
- CS215: Theory of Computation
- CS235: Data Mining Techniques
- CS272: Probabilistic Models for Artificial Intelligence
- CS205: Artificial Intelligence
- CS234: Computational Methods for Biomolecular Data
- CS238: Algorithmic Techniques in Computational Biology
- CS236: Database Management Systems
- CS267: Seminar in Databases
- CS201: Compiler Construction
- CS231: Computer Animation
Contacts
E-mail: tanaseio AT cs DOT ucr DOT edu
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